Gene mapping, discovery, and expression : methods and protocols /

Gene mapping, discovery, and expression : methods and protocols /

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Bibliographic Details
Corporate Author: SpringerLink (Online service)
Other Authors: Bina, Minou
Format: eBook
Language:English
Published: Totowa, N.J. : Humana Press, [2006]
Series:Methods in molecular biology (Clifton, N.J.) ; v. 338.
Subjects:
Chromosome Mapping > methods.
Databases, Nucleic Acid.
Gene Expression Profiling > methods.
Microarray Analysis > methods.
Gene expression.
Gene mapping > Data processing.
Gene mapping > Methodology.
Genetics > Technique.
Laboratory Manual.
Electronic books.
Online Access:Connect to the full text of this electronic book
Table of Contents:
  • Analysis of allele-specific gene expression / Julian C. Knight
  • Construction of micro-rna containing vectors for expression in mammalian cells / Yoko Fukuda, Hiroaki Kawasaki, and Kazunari Taira
  • Mining microarray data at NCBI's gene expression omnibus (GEO) / Tanya Barrett and Ron Edgar
  • The Stanford microarray database: a user's guide / Jeremy Gollub, Catherine A. Ball, and Gavin Sherlock
  • Detecting nucleosome ladders on unique DNA sequences in mouse liver nuclei / Tomara J. Fleury, Alfred Cioffi, and Arnold Stein
  • DNA methyltransferase probing of DNA-protein interactions / Scott A. Hoose and Michael P. Kladde
  • Protein binding microarrays (PBMS) for the rapid, high-throughput characterization of the sequence specificities of DNA binding proteins / Michael F. Berger and Martha L. Bulyk
  • Quantitative profiling of protein-DNA binding on microarrays / Jiannis Ragoussis, Simon Field, and Irina A. Udalova
  • Analysis of protein-DNA binding by streptavidin-agarose pulldown / Kenneth K. Wu
  • Isolation and mass spectrometry of specific DNA-binding proteins / Mariana Yaneva and Paul Tempst
  • Isolation of transcription factor complexes by in vivo biotinylation tagging and direct binding to streptavidin beads / Patrick Rodriguez ... [et al.].
  • Use of genome browsers to locate your favorite genes / Minou Bina
  • Methods for identifying and mapping recent segmental and gene duplications in eukaryotic genomes / Razi Khaja ... [et al.]
  • Identification and mapping of paralogous genes on a known genomic DNA sequence / Minou Bina
  • Quantitative DNA fiber mapping in genome research and construction of physical maps / Heinz-Ulrich G. Weier and Lisa W. Chu
  • PRINS for mapping single copy genes / Avirachan T. Tharapel and Stephen S. Wachtel
  • Vista family of computational tools for comparative analysis of DNA sequences and whole genomes / Inna Dubchak and Dmitriy V. Ryaboy
  • Computational prediction of cis-regulatory modules from multispecies alignments using Galaxy, table browser, and GALA / Laura Elnitski, David King, and Ross C. Hardison
  • Comparative promoter analysis in vertebrate genomes with the CORG workbench / Christoph Dieterich and Martin Vingron
  • cis-regulatory region analysis using BEARR / Vinsensius Berlian Vega
  • A database of 9-mers from promoter region of human protein-coding genes / Minou Bina, Phillip Wyss, and Syed Rehan Shah
  • A program toolkit for the analysis of regulatory regions of genes / Phillip Wyss, Sheryl A. Lazarus, and Minou Bina